Cheap hotels in Marathon, Florida

Find the Top Cheap and budget hotels in Marathon – 20+ Quality Options from Leading Providers

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MapView on map3.8 mi from City Center
From   US$ 211 /nightSelect
  • Stunning infinity pool with sunset views
  • Complimentary shuttle to local attractions
  • On-site dining with local flavors
MapView on map2.6 mi from City Center
From   US$ 116 /nightSelect
The Banana Bay Resort & Marina has an outdoor swimming pool, while boasting a picturesque setting in a premium area.
  • Outdoor Pools
  • Business Center
  • On-site Restaurant
1.7 mi from City Center900 yd from San Pablo Parish Hall
From   US$ 117 /nightSelect
  • On-site restaurant with full-service bar
  • Two outdoor pools with views
  • 24-hour fitness center available
  • Private Marina
  • Outdoor Pool
  • Beach Access
1.1 mi from City Center1000 yd from Conch-Air Florida Keys Scenic Flights
From   US$ 575 /nightSelect
  • Private marina for boat storage
  • Complimentary kayaks and paddleboards
  • Beautiful sunset views
  • Private Marina
  • On-site Restaurant
  • Heated Pool
2.5 mi from City Center1.1 mi from Florida Keys Community College
From   US$ 124 /nightSelect
  • Private marina with 54 rental slips
  • On-site restaurant with local seafood
  • Heated pool for year-round comfort
Holiday park
  • Outdoor pool
  • Marina access
  • Fishing
7.0 mi from City Center
From   US$ 159 /nightSelect
  • Outdoor swimming pool with BBQ facilities
  • Marina access for fishing activities
  • Pet-friendly accommodations available
  • Private Beach
  • Outdoor Pool
  • Bicycle Rental
1.2 mi from City Center1000 yd from Conch-Air Florida Keys Scenic Flights
From   US$ 171 /nightSelect
  • Private beach area for guests
  • Outdoor swimming pool with sun loungers
  • Bicycle rental for exploring
Hotel
  • Houseboat Lodging
  • Cabana Club Access
  • Bicycle Rentals
2.2 mi from City Center1.2 mi from Florida Keys Community College
From   US$ 268 /nightSelect
  • Houseboat accommodations with marine wildlife
  • Access to Cabana Club's pools and beach
  • Complimentary kayaks and bicycles available
  • Snorkeling Trips
  • Kayak Rentals
  • BBQ Grills
4.3 mi from City Center
From   US$ 204 /nightSelect
  • On-site snorkeling excursions to vibrant reefs
  • Complimentary kayak and bike rentals for guests
  • Communal BBQ grills for guest use
  • Outdoor pool
  • Business center
  • Dog-friendly
1.8 mi from City Center1100 yd from San Pablo Parish Hall
From   US$ 166 /nightSelect
  • Dolphin Research Center nearby
  • Pet-friendly accommodations
  • Complimentary hot breakfast offered
  • Outdoor Pool
  • Hot Tub
  • Kayak Rental
5.8 mi from City Center
From   US$ 207 /nightSelect
  • Pet-friendly accommodations and services
  • Oceanfront pool with stunning views
  • On-site Hideaway Cafe dining experience
  • Heated Pool
  • Canoeing
  • Boat Docking
6.7 mi from City Center
From   US$ 125 /nightSelect
  • Complimentary kayaks and paddleboards
  • Pet-friendly with nearby dog park
  • Family-run for over 50 years
  • Freshwater Pool
  • Tiki Hut
  • Boat Slips
1.3 mi from City Center1200 yd from Conch-Air Florida Keys Scenic Flights
From   US$ 97 /nightSelect
  • Scenic views of Intracoastal Gulf
  • Dockside Tiki Hut for lounging
  • Access to the world's third largest reef
  • Zero-edge Pool
  • Boat Docks
  • Tennis Court
2.2 mi from City Center1100 yd from A Deep Blue Dive Center
From   US$ 380 /nightSelect
  • Oceanfront infinity pool experience
  • Private beach access with daily maintenance
  • Full kitchens for family-friendly stays
  • Outdoor BBQ
  • Canal Access
  • Family Suites
1.2 mi from City Center1100 yd from Conch-Air Florida Keys Scenic Flights
From   US$ 100 /nightSelect
  • Complimentary use of kayaks and bikes
  • Pet-friendly accommodations available
  • Canal view rooms with scenic views
  • Outdoor Pool
  • Picnic Area
  • Barbecue Facilities
2.3 mi from City Center
From   US$ 149 /nightSelect
  • Close to Dolphin Research Center
  • Outdoor picnic and barbecue areas
  • Heated outdoor swimming pool
  • Efficiency Rooms
  • Boat Ramp
  • Swimming Pool
1.5 mi from City Center600 yd from San Pablo Parish Hall
From   US$ 144 /nightSelect
  • Brand new efficiency rooms available
  • Private dockage with easy ocean access
  • Outdoor swimming pool with sun terrace
  • Private Beach
  • Outdoor Pool
  • Dive Shop
2.5 mi from City Center
From   US$ 124 /nightSelect
  • Private beach access
  • Outdoor heated swimming pool
  • On-site dive shop
  • Outdoor Pool
  • BBQ Grills
  • Bicycle Rentals
5.1 mi from City Center
From   US$ 116 /nightSelect
  • Stunning sunset views from private balconies
  • On-site BBQ grills for family meals
  • Bicycle rentals for exploring nearby attractions
Holiday home
  • Tiki bar
  • Private shower
  • Peaceful gardens
1.7 mi from City Center1.1 mi from Conch-Air Florida Keys Scenic Flights
From   US$ 83 /nightSelect
  • Charming Tiki bar with local drinks
  • Tropical gardens for tranquil relaxation
  • Private cottages for adventurous guests
  • Private Beach
  • Outdoor Pool
  • Golf Course
1.9 mi from City Center600 yd from A Deep Blue Dive Center
From   US$ 270 /nightSelect
  • Private beach access for exclusive relaxation
  • Outdoor swimming pool for leisure activities
  • Nearby golf course and water activities
2.4 mi from City Center
From   US$ 218 /nightSelect
  • Swimming Pool
  • Children's Playground
  • Fishing Activities
800 yd from City Center600 yd from Babies BY the Sea
From   US$ 270 /nightSelect
  • Outdoor swimming pool for relaxation
  • Children's playground for family fun
  • Activities like fishing and windsurfing

Top Cheap Hotel Picks in Marathon

How much is a hotel room per night?

These hotels offer budget-friendly options close to key attractions. You can find accommodations near Sombrero Beach and the Dolphin Research Center, along with access to local restaurants and shops. Prices start around $90 per night, with guest ratings often above 8.0/10.

3 star: $90-$180
4 star: $180-$300
5 star: $300-$500

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