Boutique hotels in Tokyo
Find the Top Boutique hotels in Tokyo – 50+ Quality Options from Leading Providers
1-50 out of 50 hotels
Sort by:
high popularity
- Price: low to high
- Price: high to low
- Guest rating: high to low
- Popularity: high to low
Hotel
MapView on map4.4 mi from City Center1200 yd from Shinjuku Station
From
US$ 352
/night
- Panoramic views from rooftop pool and lounge
- Michelin-star-inspired dining at New York Grill
- Luxurious spa with year-round heated indoor pool
9.0
Perfect11 review10
MapView on map4.2 mi from City Center600 yd from Shinjuku Station
From
US$ 246
/night
- Panoramic views from exclusive Club Lounge
- Private Japanese tea ceremony experiences
- Complimentary shuttle to Tokyo Disney Resort
Hotel
8.8
Great11 review10
- Heritage Wing
- Japanese Garden
- Art Museum
1.8 mi from City Center1100 yd from Tokyo Tower
From
US$ 419
/night
- Japanese-inspired luxury design throughout
- Heritage Wing with private tea ceremony room
- Exclusive Okura Beef at fine dining restaurants
Ryokan
- On-site Spa
- Luxury Dining
- Elegant Rooms
900 yd from City Center900 yd from Tokyo Station
From
US$ 819
/night
- Traditional Japanese ryokan-style experience in Tokyo
- Luxury spa offering traditional Japanese wellness therapies
- Immersive dining showcasing local seasonal ingredients
- Hot spring
- Sky lounge
- Bowling alley
2.2 mi from City Center500 yd from Tokyo Tower
From
US$ 244
/night
- Natural hot spring spa offering deep relaxation
- Breathtaking Tokyo Tower views from premium rooms
- Exclusive rooftop dining with panoramic city views
Hotel
- Artist Rooms
- Executive Lounge
- Fine Dining
1.4 mi from City Center1100 yd from Hamamatsucho Station
From
US$ 196
/night
- Art-infused luxury accommodations
- Exclusive culinary experiences by local chefs
- Seasonal art exhibitions throughout the hotel
Hotel
- Japanese garden
- Private sauna
- Multi-course dining
4.7 mi from City Center
From
US$ 742
/night
- Luxurious rooms with private spa baths and saunas
- Authentic Japanese garden perfect for relaxing
- Exquisite dining with Japanese kaiseki and teppanyaki
- Club Lounge
- Event Spaces
- Spa Service
2.0 mi from City Center600 yd from Hamamatsucho Station
From
US$ 274
/night
- Panoramic views of Rainbow Bridge and Tokyo Bay
- Club Lounge access with exclusive dining privileges
- Yukata rental service for an authentic experience
Hotel
- Club Floors
- Indoor Pool
- Private Spa
1.7 mi from City Center1.0 mi from The Tokyo Imperial Palace
From
US$ 517
/night
- Exclusive access to Club Floors lounge
- Rooms with panoramic views of Tokyo skyline
- Dining featuring Kaiseki and teppanyaki cuisines
Hotel
- Indoor pool
- Teppanyaki restaurant
- Spa services
3.9 mi from City Center
From
US$ 201
/night
- Panoramic views of Rainbow Bridge and Tokyo Tower
- Exclusive dining on 30th-floor skyline restaurants
- SAKURA QUALITY certification for sustainability initiatives
Hotel
- Outdoor dining
- Private terraces
- Yoga classes
3.9 mi from City Center800 yd from Shibuya Crossing
From
US$ 276
/night
- Private terraces with outdoor dining
- Yoga classes and spa treatments available
- Nightclub and temporary art galleries
- Luggage Storage
- Flat-Screen TV
- Coffee Shop
3.9 mi from City Center600 yd from Shinjuku Station
From
US$ 496
/night
- Air-conditioned rooms with electric kettles
- On-site restaurant offering welcome drinks
- 24-hour reception and security services
- Dining options
- Fitness center
- 24-hour reception
1.7 mi from City Center700 yd from Tokyo Dome
From
US$ 114
/night
- Diverse dining with sushi and teppanyaki
- Warmly decorated rooms with wooden highlights
- Convenience store for guest essentials
Hotel
6.4
Nice11 review10
- Indoor Pool
- Massage Spa
- Dining Options
2.6 mi from City Center1500 yd from Ueno Station
From
US$ 401
/night
- Panoramic city views from dining
- On-site massage services available
- Art deco style with modern amenities
Hotel
- Luxury spa
- Fitness center
- Indoor pool
1300 yd from City Center1100 yd from Tokyo Station
From
US$ 603
/night
- Direct subway access from the hotel
- Spa with aromatherapy showers and massages
- Rooms with traditional Japanese-inspired design
- Michelin Dining
- Onsen Baths
- Luxury Suites
600 yd from City Center400 yd from Tokyo Station
From
US$ 453
/night
- Michelin-starred dining at SÉZANNE
- Floor-to-ceiling views in top-floor suites
- Traditional onsen baths with spa treatments
Hotel
- Seasonal Pool
- On-site Spa
- Shopping Arcade
2.0 mi from City Center300 yd from Tokyo Tower
From
US$ 205
/night
- Views of iconic Tokyo Tower
- Delectable French-Japanese cuisine
- Serene Bath House with sauna
8.6
Great22 reviews10
- Japanese Garden
- On-site Spa
- Executive Lounge
4.0 mi from City Center500 yd from Shinagawa Station
From
US$ 193
/night
- Lush gardens with 200 cherry blossom trees
- Italian cuisine with Japanese flavors at Ciliegio
- Designer interiors blending modern and traditional Japanese
Hotel
- On-site dining
- Relaxation Lounge
- Fitness centre
1.5 mi from City Center800 yd from Tokyo Dome
From
US$ 534
/night
- Elegant Japanese-style courtyard
- Seasonal Japanese kaiseki dining
- Relaxation Lounge with rooftop garden
9.8
Perfect11 review10
- Japanese Garden
- Teppanyaki Dining
- Indoor Pool
3.7 mi from City Center1600 yd from Shinagawa Station
From
US$ 147
/night
- Tranquil Japanese garden with serene views
- Combines Japanese tradition with modern style design
- Exclusive Teppanyaki dining with premium Japanese beef
Hotel
- Terrace Suite
- Dining Lounge
- Art Gallery
4.6 mi from City Center1200 yd from Shinjuku Station
From
US$ 175
/night
- Terrace Suite with stunning park views
- Diverse dining experiences on-site
- Artfully designed public spaces
- Club Lounge
- Event Spaces
- Fitness Center
4.1 mi from City Center300 yd from Shinagawa Station
From
US$ 364
/night
- Direct access to Shinagawa Station
- Exclusive Club InterContinental Lounge with city views
- Award-winning dining with live music
8.2
Great22 reviews10
- Indoor Pool
- Aesthetic Salon
- Fitness Centre
4.7 mi from City Center
From
US$ 208
/night
- Panoramic city views from rooms
- Diverse dining options on-site
- Indoor spa and fitness centre
Hotel
- Teppanyaki Restaurant
- Fitness Centre
- Spa and Wellness
1.1 mi from City Center1700 yd from Hamamatsucho Station
From
US$ 278
/night
- Teppanyaki restaurant with city views
- Luxury Simmons mattress in every room
- Direct airport limousine bus access
9.8
Perfect11 review10
- Open-air terrace
- Concierge service
- In-room massages
2.5 mi from City Center1600 yd from Tokyo Skytree
From
US$ 177
/night
- Open-air terrace with Tokyo Skytree views
- Stylish French restaurant & bar
- Chic rooms with dark-wood furnishings
- Breakfast buffet
- Luggage storage
- 24-hour reception
1600 yd from City Center1700 yd from Tokyo Station
From
US$ 91
/night
- Complimentary breakfast buffet daily
- Luggage storage services available
- 24-hour front desk support
- Italian Restaurant
- Massage Services
- Flat-Screen TV
4.3 mi from City Center800 yd from Shinjuku Station
From
US$ 167
/night
- Next to Nishi Shinjuku Subway Station
- On-site Italian dining restaurant
- Accessible 24-hour reception services
- On-site Restaurant
- Massage Services
- 24-hour Reception
2.4 mi from City Center600 yd from Roppongi Hills
From
US$ 54
/night
- Lively Roppongi area access
- Relaxing on-site massage services
- Modern air-conditioned rooms
Hotel
- French Restaurant
- Smart TVs
- Mist Showers
1100 yd from City Center1100 yd from Tokyo Station
From
US$ 124
/night
- Ultra-fine mist shower experience
- French restaurant with elegant design
- Smart TVs with streaming services
Capsule hotel
- Public Bath
- Massage Chair
- Jet Bath
3.8 mi from City Center400 yd from Shinjuku Station
From
US$ 53
/night
- Male-only sleeping capsules with tablets
- Free breakfasts and complimentary green tea
- Hot spring bath and massage services
Hotel
- Flat-screen TV
- Massage
- 24-hour reception
1.6 mi from City Center1100 yd from The Tokyo Imperial Palace
From
US$ 207
/night
- 1-minute walk from Hanzomon Subway Station
- Daily buffet breakfast with local specialties
- On-site massage services available
5.0
Guest rating33 reviews10
- Breakfast Corner
- Launderette
- Air Purifier
1.1 mi from City Center
From
US$ 62
/night
- Comfortable modern rooms with air purifier
- Free breakfast with Western and Japanese options
- Launderette available for guest use
- Flat-screen TV
- Electric kettle
- Business center
1400 yd from City Center1300 yd from Tokyo Station
From
US$ 291
/night
- Stylishly modern rooms with elegant decor
- European cuisine at on-site Furutoshi Restaurant
- Aromatherapy treatments available on request
- Restaurant
- Free Wi-Fi
- Air Conditioning
1000 yd from City Center1000 yd from Tokyo Station
From
US$ 147
/night
- European-style architecture and decor
- Gourmet Italian cuisine on-site
- Classically charming air-conditioned rooms
- Flat-screen TV
- Coin-launderette
- Luggage storage
1.7 mi from City Center
From
US$ 48
/night
- Free breakfast with fresh fruits and eggs
- Modern rooms with flat-screen TVs
- Complimentary welcome coffee upon arrival
Guest house
- Public Bath
- Coffee Shop
- Concierge Service
3.1 mi from City Center1.1 mi from Ueno Station
From
US$ 130
/night
- Traditional tatami rooms with shared baths
- Authentic Yanesan walking tours available
- Breakfast at local HAGI CAFE
Hotel
- Deluxe shower
- Italian restaurant
- Massage service
4.7 mi from City Center
From
US$ 77
/night
- Deluxe multi-head shower in all rooms
- Gourmet Italian breakfast buffet daily
- 24-hour front desk services available
- Foot massage
- LCD TV
- Personal fridge
4.5 mi from City Center700 yd from Shibuya Crossing
From
US$ 131
/night
- Massage services available for relaxation
- Yukata robes provided for guest comfort
- Electric kettles with green tea in rooms
Hotel
- Rooftop lounge
- Beauty salon
- French restaurant
1.6 mi from City Center1400 yd from The Tokyo Imperial Palace
From
US$ 226
/night
- Rooftop lounge with Imperial Palace views
- Onsite beauty salon and acupuncture therapy
- French bistronomy restaurant on site
Hotel
9.2
Perfect11 review10
- On-site Spa
- Business Centre
- Luggage Storage
1.4 mi from City Center1000 yd from The Tokyo Imperial Palace
From
US$ 155
/night
- Views of Imperial Palace gardens
- Multiple on-site dining options available
- Close proximity to jogging track
- Outdoor pools
- Fitness center
- Lush gardens
4.1 mi from City Center600 yd from Shinagawa Station
From
US$ 102
/night
- Seasonal outdoor pools with sun loungers
- Lush garden setting for relaxation and strolls
- Private balconies in select guest rooms
Hotel
- On-site Spa
- Massage Chair
- Restaurant
2.1 mi from City Center700 yd from Hamamatsucho Station
From
US$ 100
/night
- Stylish dining at Fontaine de Shiba
- Relaxing massage chair spa
- 24-hour reception for convenience
- Paid Parking
- Flat-screen TV
- Electric Kettle
7.2 mi from City Center
From
US$ 63
/night
- 24-hour reception service
- Restaurant on-site
- Non-smoking property type
- Craft Brewery
- Barbecue Restaurant
- Open Terrace
1.3 mi from City Center
From
US$ 29
/night
- On-site craft beer brewery
- Scenic terrace overlooking Sumida River
- Diverse breakfast options available
Hostel
- Flat-screen TV
- Electric kettle
- Cookware set
2.6 mi from City Center1600 yd from Tokyo Skytree
From
US$ 18
/night
- Flat-screen TV in every room
- Electric kettle for in-room convenience
- Cookware and utensils for self-catering
- Free WiFi
- Flat-screen TV
- Luggage storage
2.0 mi from City Center600 yd from Hamamatsucho Station
From
US$ 132
/night
- 24-hour front desk service
- On-site massage service available
- Air-conditioned non-smoking rooms
- Private Sauna
- Karaoke Room
- Spa Bath
3.7 mi from City Center500 yd from Godzilla Head
From
US$ 136
/night
- Unique rooms with private sauna
- On-site karaoke for entertainment
- Adults-only atmosphere for privacy
Capsule hotel
- Hot Tub
- Shared Lounge
- Public Bath
4.7 mi from City Center1000 yd from Shibuya Crossing
From
US$ 23
/night
- Female-only capsule hotel environment
- On-site hot tub for relaxation
- 24-hour security for guest safety
Hotel
- On-site Spa
- City Views
- Private Bathroom
From
US$ 369
/night
- On-site spa and wellness centre
- Luxury air-conditioned rooms available
- Scenic city view terrace
Hotel
- In-house café
- Massage services
- Convenience store
4.7 mi from City Center
From
US$ 84
/night
- 2-minute walk from Ikebukuro Station
- Café and convenience store on-site
- Massage services available
Saved
Save