Boutique hotels in Tokyo

Find the Top Boutique hotels in Tokyo – 50+ Quality Options from Leading Providers

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MapView on map4.4 mi from City Center1200 yd from Shinjuku Station
From   US$ 352 /nightSelect
  • Panoramic views from rooftop pool and lounge
  • Michelin-star-inspired dining at New York Grill
  • Luxurious spa with year-round heated indoor pool
9.0
Perfect1 review
MapView on map4.2 mi from City Center600 yd from Shinjuku Station
From   US$ 246 /nightSelect
  • Panoramic views from exclusive Club Lounge
  • Private Japanese tea ceremony experiences
  • Complimentary shuttle to Tokyo Disney Resort
8.8
Great1 review
  • Heritage Wing
  • Japanese Garden
  • Art Museum
1.8 mi from City Center1100 yd from Tokyo Tower
From   US$ 419 /nightSelect
  • Japanese-inspired luxury design throughout
  • Heritage Wing with private tea ceremony room
  • Exclusive Okura Beef at fine dining restaurants
  • On-site Spa
  • Luxury Dining
  • Elegant Rooms
900 yd from City Center900 yd from Tokyo Station
From   US$ 819 /nightSelect
  • Traditional Japanese ryokan-style experience in Tokyo
  • Luxury spa offering traditional Japanese wellness therapies
  • Immersive dining showcasing local seasonal ingredients
  • Hot spring
  • Sky lounge
  • Bowling alley
2.2 mi from City Center500 yd from Tokyo Tower
From   US$ 244 /nightSelect
  • Natural hot spring spa offering deep relaxation
  • Breathtaking Tokyo Tower views from premium rooms
  • Exclusive rooftop dining with panoramic city views
  • Artist Rooms
  • Executive Lounge
  • Fine Dining
1.4 mi from City Center1100 yd from Hamamatsucho Station
From   US$ 196 /nightSelect
  • Art-infused luxury accommodations
  • Exclusive culinary experiences by local chefs
  • Seasonal art exhibitions throughout the hotel
  • Japanese garden
  • Private sauna
  • Multi-course dining
4.7 mi from City Center
From   US$ 742 /nightSelect
  • Luxurious rooms with private spa baths and saunas
  • Authentic Japanese garden perfect for relaxing
  • Exquisite dining with Japanese kaiseki and teppanyaki
  • Club Lounge
  • Event Spaces
  • Spa Service
2.0 mi from City Center600 yd from Hamamatsucho Station
From   US$ 274 /nightSelect
  • Panoramic views of Rainbow Bridge and Tokyo Bay
  • Club Lounge access with exclusive dining privileges
  • Yukata rental service for an authentic experience
  • Club Floors
  • Indoor Pool
  • Private Spa
1.7 mi from City Center1.0 mi from The Tokyo Imperial Palace
From   US$ 517 /nightSelect
  • Exclusive access to Club Floors lounge
  • Rooms with panoramic views of Tokyo skyline
  • Dining featuring Kaiseki and teppanyaki cuisines
  • Indoor pool
  • Teppanyaki restaurant
  • Spa services
3.9 mi from City Center
From   US$ 201 /nightSelect
  • Panoramic views of Rainbow Bridge and Tokyo Tower
  • Exclusive dining on 30th-floor skyline restaurants
  • SAKURA QUALITY certification for sustainability initiatives
  • Outdoor dining
  • Private terraces
  • Yoga classes
3.9 mi from City Center800 yd from Shibuya Crossing
From   US$ 276 /nightSelect
  • Private terraces with outdoor dining
  • Yoga classes and spa treatments available
  • Nightclub and temporary art galleries
  • Luggage Storage
  • Flat-Screen TV
  • Coffee Shop
3.9 mi from City Center600 yd from Shinjuku Station
From   US$ 496 /nightSelect
  • Air-conditioned rooms with electric kettles
  • On-site restaurant offering welcome drinks
  • 24-hour reception and security services
  • Dining options
  • Fitness center
  • 24-hour reception
1.7 mi from City Center700 yd from Tokyo Dome
From   US$ 114 /nightSelect
  • Diverse dining with sushi and teppanyaki
  • Warmly decorated rooms with wooden highlights
  • Convenience store for guest essentials
6.4
Nice1 review
  • Indoor Pool
  • Massage Spa
  • Dining Options
2.6 mi from City Center1500 yd from Ueno Station
From   US$ 401 /nightSelect
  • Panoramic city views from dining
  • On-site massage services available
  • Art deco style with modern amenities
  • Luxury spa
  • Fitness center
  • Indoor pool
1300 yd from City Center1100 yd from Tokyo Station
From   US$ 603 /nightSelect
  • Direct subway access from the hotel
  • Spa with aromatherapy showers and massages
  • Rooms with traditional Japanese-inspired design
  • Michelin Dining
  • Onsen Baths
  • Luxury Suites
600 yd from City Center400 yd from Tokyo Station
From   US$ 453 /nightSelect
  • Michelin-starred dining at SÉZANNE
  • Floor-to-ceiling views in top-floor suites
  • Traditional onsen baths with spa treatments
  • Seasonal Pool
  • On-site Spa
  • Shopping Arcade
2.0 mi from City Center300 yd from Tokyo Tower
From   US$ 205 /nightSelect
  • Views of iconic Tokyo Tower
  • Delectable French-Japanese cuisine
  • Serene Bath House with sauna
  • Japanese Garden
  • On-site Spa
  • Executive Lounge
4.0 mi from City Center500 yd from Shinagawa Station
From   US$ 193 /nightSelect
  • Lush gardens with 200 cherry blossom trees
  • Italian cuisine with Japanese flavors at Ciliegio
  • Designer interiors blending modern and traditional Japanese
  • On-site dining
  • Relaxation Lounge
  • Fitness centre
1.5 mi from City Center800 yd from Tokyo Dome
From   US$ 534 /nightSelect
  • Elegant Japanese-style courtyard
  • Seasonal Japanese kaiseki dining
  • Relaxation Lounge with rooftop garden
9.8
Perfect1 review
  • Japanese Garden
  • Teppanyaki Dining
  • Indoor Pool
3.7 mi from City Center1600 yd from Shinagawa Station
From   US$ 147 /nightSelect
  • Tranquil Japanese garden with serene views
  • Combines Japanese tradition with modern style design
  • Exclusive Teppanyaki dining with premium Japanese beef
  • Terrace Suite
  • Dining Lounge
  • Art Gallery
4.6 mi from City Center1200 yd from Shinjuku Station
From   US$ 175 /nightSelect
  • Terrace Suite with stunning park views
  • Diverse dining experiences on-site
  • Artfully designed public spaces
  • Club Lounge
  • Event Spaces
  • Fitness Center
4.1 mi from City Center300 yd from Shinagawa Station
From   US$ 364 /nightSelect
  • Direct access to Shinagawa Station
  • Exclusive Club InterContinental Lounge with city views
  • Award-winning dining with live music
8.2
Great2 reviews
  • Indoor Pool
  • Aesthetic Salon
  • Fitness Centre
4.7 mi from City Center
From   US$ 208 /nightSelect
  • Panoramic city views from rooms
  • Diverse dining options on-site
  • Indoor spa and fitness centre
  • Teppanyaki Restaurant
  • Fitness Centre
  • Spa and Wellness
1.1 mi from City Center1700 yd from Hamamatsucho Station
From   US$ 278 /nightSelect
  • Teppanyaki restaurant with city views
  • Luxury Simmons mattress in every room
  • Direct airport limousine bus access
9.8
Perfect1 review
  • Open-air terrace
  • Concierge service
  • In-room massages
2.5 mi from City Center1600 yd from Tokyo Skytree
From   US$ 177 /nightSelect
  • Open-air terrace with Tokyo Skytree views
  • Stylish French restaurant & bar
  • Chic rooms with dark-wood furnishings
  • Breakfast buffet
  • Luggage storage
  • 24-hour reception
1600 yd from City Center1700 yd from Tokyo Station
From   US$ 91 /nightSelect
  • Complimentary breakfast buffet daily
  • Luggage storage services available
  • 24-hour front desk support
  • Italian Restaurant
  • Massage Services
  • Flat-Screen TV
4.3 mi from City Center800 yd from Shinjuku Station
From   US$ 167 /nightSelect
  • Next to Nishi Shinjuku Subway Station
  • On-site Italian dining restaurant
  • Accessible 24-hour reception services
  • On-site Restaurant
  • Massage Services
  • 24-hour Reception
2.4 mi from City Center600 yd from Roppongi Hills
From   US$ 54 /nightSelect
  • Lively Roppongi area access
  • Relaxing on-site massage services
  • Modern air-conditioned rooms
  • French Restaurant
  • Smart TVs
  • Mist Showers
1100 yd from City Center1100 yd from Tokyo Station
From   US$ 124 /nightSelect
  • Ultra-fine mist shower experience
  • French restaurant with elegant design
  • Smart TVs with streaming services
  • Public Bath
  • Massage Chair
  • Jet Bath
3.8 mi from City Center400 yd from Shinjuku Station
From   US$ 53 /nightSelect
  • Male-only sleeping capsules with tablets
  • Free breakfasts and complimentary green tea
  • Hot spring bath and massage services
  • Flat-screen TV
  • Massage
  • 24-hour reception
1.6 mi from City Center1100 yd from The Tokyo Imperial Palace
From   US$ 207 /nightSelect
  • 1-minute walk from Hanzomon Subway Station
  • Daily buffet breakfast with local specialties
  • On-site massage services available
5.0
Guest rating3 reviews
  • Breakfast Corner
  • Launderette
  • Air Purifier
1.1 mi from City Center
From   US$ 62 /nightSelect
  • Comfortable modern rooms with air purifier
  • Free breakfast with Western and Japanese options
  • Launderette available for guest use
  • Flat-screen TV
  • Electric kettle
  • Business center
1400 yd from City Center1300 yd from Tokyo Station
From   US$ 291 /nightSelect
  • Stylishly modern rooms with elegant decor
  • European cuisine at on-site Furutoshi Restaurant
  • Aromatherapy treatments available on request
  • Restaurant
  • Free Wi-Fi
  • Air Conditioning
1000 yd from City Center1000 yd from Tokyo Station
From   US$ 147 /nightSelect
  • European-style architecture and decor
  • Gourmet Italian cuisine on-site
  • Classically charming air-conditioned rooms
  • Flat-screen TV
  • Coin-launderette
  • Luggage storage
1.7 mi from City Center
From   US$ 48 /nightSelect
  • Free breakfast with fresh fruits and eggs
  • Modern rooms with flat-screen TVs
  • Complimentary welcome coffee upon arrival
Guest house
  • Public Bath
  • Coffee Shop
  • Concierge Service
3.1 mi from City Center1.1 mi from Ueno Station
From   US$ 130 /nightSelect
  • Traditional tatami rooms with shared baths
  • Authentic Yanesan walking tours available
  • Breakfast at local HAGI CAFE
  • Deluxe shower
  • Italian restaurant
  • Massage service
4.7 mi from City Center
From   US$ 77 /nightSelect
  • Deluxe multi-head shower in all rooms
  • Gourmet Italian breakfast buffet daily
  • 24-hour front desk services available
  • Foot massage
  • LCD TV
  • Personal fridge
4.5 mi from City Center700 yd from Shibuya Crossing
From   US$ 131 /nightSelect
  • Massage services available for relaxation
  • Yukata robes provided for guest comfort
  • Electric kettles with green tea in rooms
  • Rooftop lounge
  • Beauty salon
  • French restaurant
1.6 mi from City Center1400 yd from The Tokyo Imperial Palace
From   US$ 226 /nightSelect
  • Rooftop lounge with Imperial Palace views
  • Onsite beauty salon and acupuncture therapy
  • French bistronomy restaurant on site
9.2
Perfect1 review
  • On-site Spa
  • Business Centre
  • Luggage Storage
1.4 mi from City Center1000 yd from The Tokyo Imperial Palace
From   US$ 155 /nightSelect
  • Views of Imperial Palace gardens
  • Multiple on-site dining options available
  • Close proximity to jogging track
  • Outdoor pools
  • Fitness center
  • Lush gardens
4.1 mi from City Center600 yd from Shinagawa Station
From   US$ 102 /nightSelect
  • Seasonal outdoor pools with sun loungers
  • Lush garden setting for relaxation and strolls
  • Private balconies in select guest rooms
  • On-site Spa
  • Massage Chair
  • Restaurant
2.1 mi from City Center700 yd from Hamamatsucho Station
From   US$ 100 /nightSelect
  • Stylish dining at Fontaine de Shiba
  • Relaxing massage chair spa
  • 24-hour reception for convenience
  • Paid Parking
  • Flat-screen TV
  • Electric Kettle
7.2 mi from City Center
From   US$ 63 /nightSelect
  • 24-hour reception service
  • Restaurant on-site
  • Non-smoking property type
  • Craft Brewery
  • Barbecue Restaurant
  • Open Terrace
1.3 mi from City Center
From   US$ 29 /nightSelect
  • On-site craft beer brewery
  • Scenic terrace overlooking Sumida River
  • Diverse breakfast options available
  • Flat-screen TV
  • Electric kettle
  • Cookware set
2.6 mi from City Center1600 yd from Tokyo Skytree
From   US$ 18 /nightSelect
  • Flat-screen TV in every room
  • Electric kettle for in-room convenience
  • Cookware and utensils for self-catering
  • Free WiFi
  • Flat-screen TV
  • Luggage storage
2.0 mi from City Center600 yd from Hamamatsucho Station
From   US$ 132 /nightSelect
  • 24-hour front desk service
  • On-site massage service available
  • Air-conditioned non-smoking rooms
  • Private Sauna
  • Karaoke Room
  • Spa Bath
3.7 mi from City Center500 yd from Godzilla Head
From   US$ 136 /nightSelect
  • Unique rooms with private sauna
  • On-site karaoke for entertainment
  • Adults-only atmosphere for privacy
  • Hot Tub
  • Shared Lounge
  • Public Bath
4.7 mi from City Center1000 yd from Shibuya Crossing
From   US$ 23 /nightSelect
  • Female-only capsule hotel environment
  • On-site hot tub for relaxation
  • 24-hour security for guest safety
  • On-site Spa
  • City Views
  • Private Bathroom
From   US$ 369 /nightSelect
  • On-site spa and wellness centre
  • Luxury air-conditioned rooms available
  • Scenic city view terrace
  • In-house café
  • Massage services
  • Convenience store
4.7 mi from City Center
From   US$ 84 /nightSelect
  • 2-minute walk from Ikebukuro Station
  • Café and convenience store on-site
  • Massage services available