Boutique hotels in San Diego

Find the Top Boutique hotels in San Diego – 60+ Quality Options from Leading Providers

Check-in
Select date
Check-out
Select date
Rooms & Guests
22 Guests, 1 Room
1Filter & Sort
View map
51-69 out of 69 hotels
1Filter & Sort
View map
Sort by: high popularity
  • Price: low to high
  • Price: high to low
  • Guest rating: high to low
  • Popularity: high to low
MapView on map22.0 km from City Centre
From   US$ 142 /nightSelect
  • Full kitchens in every suite
  • Outdoor pool and fitness center
  • Free daily breakfast buffet
MapView on map1.9 km from City Centre400 m from Petco Park
From   US$ 197 /nightSelect
  • Stunning views from The Nolen rooftop bar
  • Complimentary welcome drink at check-in
  • Proximity to Petco Park and nightlife
  • Outdoor Pool
  • Business Center
  • Fitness Center
24.3 km from City Centre
From   US$ 160 /nightSelect
  • Mosaic Restaurant with local cuisine
  • Stylish event spaces for gatherings
  • Pet-friendly accommodations available
  • Swimming Pool
  • Hot Tub
  • Fitness Centre
10.2 km from City Centre
From   US$ 247 /nightSelect
  • Outdoor swimming pool and hot tub
  • On-site bar and restaurant available
  • Fitness centre for guest workouts
  • Event Spaces
  • Accessible Rooms
  • Pet-Friendly
1000 m from City Centre1.2 km from USS Midway Museum
From   US$ 118 /nightSelect
  • Centrally located in vibrant Little Italy
  • Stylish, comfortable pet-friendly accommodations
  • Complimentary breakfast with diverse options
  • Rooftop Pool
  • Fine Dining
  • Yoga Classes
1.3 km from City Centre1.0 km from Petco Park
From   US$ 317 /nightSelect
  • Rooftop bar with stunning city views
  • Pet-friendly with special amenities
  • Complimentary evening wine social hour
Hotel
  • Oceanfront Lawn
  • Balinese Suites
  • Rooftop Terrace
17.3 km from City Centre500 m from La Jolla Cove
From   US$ 329 /nightSelect
  • All-inclusive weddings with oceanfront buyout options
  • Balinese-inspired suites with handcrafted furnishings
  • Private rooftop with stunning ocean views
  • Serenity Spa
  • Bistro 39
  • Fitness Center
22.1 km from City Centre
From   US$ 176 /nightSelect
  • On-site Bistro 39 with local flavors
  • Exclusive Serenity Spa with various treatments
  • Free local shuttle for events
  • Ocean-view pool
  • Private villas
  • Mediterranean Room
17.3 km from City Centre300 m from La Jolla Cove
From   US$ 309 /nightSelect
  • Breathtaking ocean views from dining areas
  • Mediterranean-inspired dining with live music
  • Iconic Spanish-style architecture and charm
  • Outdoor pool
  • On-site restaurant
  • Business center
From   US$ 209 /nightSelect
  • Direct access to Little Italy dining
  • Complimentary airport shuttle service
  • Rooms with stunning bay views
  • Outdoor pool
  • Fitness center
  • Game room
3.9 km from City Centre1000 m from Fashion Valley Mall
From   US$ 272 /nightSelect
  • Spacious family suites with kitchenettes
  • Complimentary evening social with snacks
  • Game room with pool table for families
  • Outdoor Lounge
  • On-site Dining
  • Fitness Center
29.3 km from City Centre
From   US$ 168 /nightSelect
  • Heated outdoor pool and hot tub
  • Complimentary shuttle service within 5 miles
  • Pet-friendly environment for travelers
  • Rooftop terrace
  • Continental breakfast
  • 24-hour reception
1000 m from City Centre1.3 km from Petco Park
From   US$ 117 /nightSelect
  • Stunning rooftop terrace with city views
  • Extensive breakfast with hot food options
  • Exceptionally friendly and helpful staff
  • Outdoor pool
  • Fitness centre
  • Bicycle rental
1.2 km from City Centre1.4 km from USS Midway Museum
From   US$ 199 /nightSelect
  • Fully equipped kitchens in every suite
  • Year-round outdoor swimming pool
  • On-site fitness center available
9.4
Perfect1 review
  • Rooftop Deck
  • French Diner
  • Custom Furnishings
1.5 km from City Centre800 m from Petco Park
From   US$ 92 /nightSelect
  • Rooftop deck with stunning views
  • 24-hour St. James French Diner
  • Historic ambiance with unique character
  • Outdoor Pool
  • Fitness Center
  • Meeting Space
33.2 km from City Centre
From   US$ 152 /nightSelect
  • Exceptional staff providing personalized care
  • Beautiful park views surrounding the property
  • Bistro serves meals from 6 AM daily
  • Heated Pool
  • Business Center
  • Outdoor Grill
19.9 km from City Centre
From   US$ 155 /nightSelect
  • Complimentary dinner three nights weekly
  • Family-sized suites with separate living areas
  • Outdoor barbecue area for guest use
  • Fitness centre
  • Sauna
  • Business centre
1.4 km from City Centre900 m from Petco Park
From   US$ 175 /nightSelect
  • Exceptional location in Gaslamp District
  • Kitchenettes in every studio room
  • Daily social activities for guests
  • Fitness center
  • Outdoor pool
  • Electric charging
3.4 km from City Centre1.4 km from Old Town San Diego State Historic Park
From   US$ 117 /nightSelect
  • Complimentary airport shuttle service
  • Electric vehicle charging stations available
  • Outdoor heated swimming pool
  • 1
  • 2